Programmer: Wade Lo Art designers: SY Cheng & Jong Liu Lab of Dr. Ping-Chiang Lyu, Institute of Bioinformatics and Structural Biology, NTHU, Taiwan, R.O.C.
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Organism: Reference pathway Reference pathway (Reaction) Reference pathway (KO) All organisms in KEGG Acinetobacter sp. ADP1 Aeropyrum pernix Agrobacterium tumefaciens C58 (Cereon) Agrobacterium tumefaciens C58 (UWash/Dupont) Anabaena sp. PCC7120 Anabaena variabilis Anaplasma marginale Aquifex aeolicus Arabidopsis thaliana (thale cress) Archaeoglobus fulgidus Ashbya gossypii (Eremothecium gossypii) Azoarcus sp. EbN1 Bacillus anthracis A2012 Bacillus anthracis Ames Bacillus anthracis Ames 0581 Bacillus anthracis Sterne Bacillus cereus ATCC 10987 Bacillus cereus ATCC 14579 Bacillus cereus ZK Bacillus clausii Bacillus halodurans Bacillus licheniformis ATCC 14580 Bacillus licheniformis DSM13 Bacillus subtilis Bacillus thuringiensis Bacteroides fragilis NCTC9343 Bacteroides fragilis YCH46 Bacteroides thetaiotaomicron Bartonella henselae Bartonella quintana Bdellovibrio bacteriovorus Bifidobacterium longum Blochmannia floridanus Blochmannia pennsylvanicus Bordetella bronchiseptica Bordetella parapertussis Bordetella pertussis Borrelia burgdorferi Borrelia garinii Bos taurus (cow) Bradyrhizobium japonicum Brucella abortus Brucella melitensis Brucella melitensis biovar Abortus Brucella suis Buchnera aphidicola APS Buchnera aphidicola Bp Buchnera aphidicola Sg Burkholderia mallei Burkholderia pseudomallei 1710b Burkholderia pseudomallei K96243 Burkholderia sp. 383 Burkholderia thailandensis Caenorhabditis elegans (nematode) Campylobacter jejuni NCTC11168 Campylobacter jejuni RM1221 Candida albicans Carboxydothermus hydrogenoformans Caulobacter crescentus Chlamydia muridarum Chlamydia trachomatis serovar A Chlamydia trachomatis serovar D Chlamydophila abortus Chlamydophila caviae Chlamydophila pneumoniae AR39 Chlamydophila pneumoniae CWL029 Chlamydophila pneumoniae J138 Chlamydophila pneumoniae TW183 Chlorobium chlorochromatii Chlorobium tepidum Chromobacterium violaceum Clostridium acetobutylicum Clostridium perfringens Clostridium tetani E88 Colwellia psychrerythraea Corynebacterium diphtheriae Corynebacterium efficiens Corynebacterium glutamicum (Bielefeld) Corynebacterium glutamicum (Kitasato) Corynebacterium jeikeium Coxiella burnetii Cryptococcus neoformans JEC21 Cryptosporidium hominis Cryptosporidium parvum Cyanidioschyzon merolae Danio rerio (zebrafish) Dechloromonas aromatica Dehalococcoides CBDB1 Dehalococcoides ethenogenes Deinococcus radiodurans Desulfotalea psychrophila Desulfovibrio desulfuricans Desulfovibrio vulgaris Hildenborough Dictyostelium discoideum Drosophila melanogaster (fruit fly) Ehrlichia canis Ehrlichia ruminantium Gardel Ehrlichia ruminantium Welgevonden (France) Ehrlichia ruminantium Welgevonden (South Africa) Encephalitozoon cuniculi Entamoeba histolytica Enterococcus faecalis Erwinia carotovora Escherichia coli CFT073 Escherichia coli K-12 MG1655 Escherichia coli K-12 W3110 Escherichia coli O157 EDL933 Escherichia coli O157 Sakai Francisella tularensis Fusobacterium nucleatum Gallus gallus (chicken) Geobacillus kaustophilus Geobacter sulfurreducens Gloeobacter violaceus Gluconobacter oxydans Haemophilus ducreyi Haemophilus influenzae (serotype d) Haemophilus influenzae 86-028NP (nontypeable) Hahella chejuensis Haloarcula marismortui Halobacterium sp. NRC-1 Helicobacter hepaticus Helicobacter pylori 26695 Helicobacter pylori J99 Homo sapiens (human) Idiomarina loihiensis Lactobacillus acidophilus Lactobacillus johnsonii Lactobacillus plantarum Lactobacillus sakei Lactococcus lactis Legionella pneumophila Lens Legionella pneumophila Paris Legionella pneumophila Philadelphia 1 Leifsonia xyli xyli CTCB07 Leishmania major Leptospira interrogans serovar Copenhageni Leptospira interrogans serovar lai Listeria innocua Listeria monocytogenes EGD-e Listeria monocytogenes F2365 Mannheimia succiniciproducens Mesoplasma florum Mesorhizobium loti Methanobacterium thermoautotrophicum Methanococcus jannaschii Methanococcus maripaludis Methanopyrus kandleri Methanosarcina acetivorans Methanosarcina barkeri Methanosarcina mazei Methanosphaera stadtmanae Methylococcus capsulatus Moorella thermoacetica Mus musculus (mouse) Mycobacterium avium paratuberculosis Mycobacterium bovis Mycobacterium leprae Mycobacterium tuberculosis CDC1551 Mycobacterium tuberculosis H37Rv Mycoplasma capricolum Mycoplasma gallisepticum Mycoplasma genitalium Mycoplasma hyopneumoniae 232 Mycoplasma hyopneumoniae 7448 Mycoplasma hyopneumoniae J Mycoplasma mobile Mycoplasma mycoides Mycoplasma penetrans Mycoplasma pneumoniae Mycoplasma pulmonis Mycoplasma synoviae Natronomonas pharaonis Neisseria gonorrhoeae Neisseria meningitidis MC58 (serogroup B) Neisseria meningitidis Z2491 (serogroup A) Nitrobacter winogradskyi Nitrosococcus oceani Nitrosomonas europaea Nitrosospira multiformis Nocardia farcinica Oceanobacillus iheyensis Parachlamydia sp. UWE25 Pasteurella multocida Pelagibacter ubique Pelodictyon luteolum Photobacterium profundum Photorhabdus luminescens Phytoplasma sp. onion yellows Picrophilus torridus Plasmodium falciparum Porphyromonas gingivalis Prochlorococcus marinus MED4 Prochlorococcus marinus MIT9312 Prochlorococcus marinus MIT9313 Prochlorococcus marinus NATL2A Prochlorococcus marinus SS120 Propionibacterium acnes Pseudoalteromonas haloplanktis Pseudomonas aeruginosa Pseudomonas fluorescens Pf-5 Pseudomonas fluorescens PfO-1 Pseudomonas putida Pseudomonas syringae B728a Pseudomonas syringae DC3000 Pseudomonas syringae phaseolicola 1448A Psychrobacter arcticum Pyrobaculum aerophilum Pyrococcus abyssi Pyrococcus furiosus Pyrococcus horikoshii Ralstonia eutropha Ralstonia solanacearum Rattus norvegicus (rat) Rhodobacter sphaeroides Rhodopirellula baltica Rhodopseudomonas palustris CGA009 Rhodospirillum rubrum Rickettsia conorii Rickettsia felis Rickettsia prowazekii Rickettsia typhi Saccharomyces cerevisiae Salinibacter ruber Salmonella enterica serovar Choleraesuis Salmonella enterica serovar Paratyphi A Salmonella enterica serovar typhi Ty2 Salmonella typhi CT18 Salmonella typhimurium LT2 Schizosaccharomyces pombe Shewanella oneidensis Shigella boydii Shigella dysenteriae Shigella flexneri 2457T Shigella flexneri 301 Shigella sonnei Silicibacter pomeroyi Sinorhizobium meliloti Staphylococcus aureus COL Staphylococcus aureus MRSA252 Staphylococcus aureus MSSA476 Staphylococcus aureus Mu50 Staphylococcus aureus MW2 Staphylococcus aureus N315 Staphylococcus aureus RF122 Staphylococcus epidermidis ATCC 12228 Staphylococcus epidermidis RP62A Staphylococcus haemolyticus Staphylococcus saprophyticus Streptococcus agalactiae 2603 Streptococcus agalactiae A909 Streptococcus agalactiae NEM316 Streptococcus mutans Streptococcus pneumoniae R6 Streptococcus pneumoniae TIGR4 Streptococcus pyogenes MGAS10394 (serotype M6) Streptococcus pyogenes MGAS315 (serotype M3) Streptococcus pyogenes MGAS5005 (serotype M1) Streptococcus pyogenes MGAS6180 (serotype M28) Streptococcus pyogenes MGAS8232 (serotype M18) Streptococcus pyogenes SF370 (serotype M1) Streptococcus pyogenes SSI-1 (serotype M3) Streptococcus thermophilus CNRZ1066 Streptococcus thermophilus LMG18311 Streptomyces avermitilis Streptomyces coelicolor Sulfolobus acidocaldarius Sulfolobus solfataricus Sulfolobus tokodaii Sus scrofa (pig) Symbiobacterium thermophilum Synechococcus sp. CC9605 Synechococcus sp. CC9902 Synechococcus sp. PCC6301 Synechococcus sp. PCC7942 Synechococcus sp. WH8102 Synechocystis sp. PCC6803 Theileria parva Thermoanaerobacter tengcongensis Thermobifida fusca Thermococcus kodakaraensis Thermoplasma acidophilum Thermoplasma volcanium Thermosynechococcus elongatus Thermotoga maritima Thermus thermophilus HB27 Thermus thermophilus HB8 Thiobacillus denitrificans Thiomicrospira crunogena Thiomicrospira denitrificans Treponema denticola Treponema pallidum Tropheryma whipplei TW08/27 Tropheryma whipplei Twist Trypanosoma brucei Trypanosoma cruzi Ureaplasma urealyticum Vibrio cholerae Vibrio fischeri Vibrio parahaemolyticus Vibrio vulnificus CMCP6 Vibrio vulnificus YJ016 Wigglesworthia brevipalpis Wolbachia wBm Wolbachia wMel Wolinella succinogenes Xanthomonas axonopodis Xanthomonas campestris 8004 Xanthomonas campestris ATCC 33913 Xanthomonas campestris pv. vesicatoria Xanthomonas oryzae Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Xylella fastidiosa 9a5c Xylella fastidiosa Temecula1 Yersinia pestis CO92 Yersinia pestis KIM Yersinia pestis Mediaevails Yersinia pseudotuberculosis Zymomonas mobilis Pathway: 1. Metabolism 1.1 Carbohydrate Metabolism      Glycolysis / Gluconeogenesis      Citrate cycle (TCA cycle)      Pentose phosphate pathway      Pentose and glucuronate interconversions      Fructose and mannose metabolism      Galactose metabolism      Ascorbate and aldarate metabolism      Starch and sucrose metabolism      Aminosugars metabolism      Nucleotide sugars metabolism      Pyruvate metabolism      Glyoxylate and dicarboxylate metabolism      Propanoate metabolism      Butanoate metabolism      C5-Branched dibasic acid metabolism      Inositol metabolism      Inositol phosphate metabolism 1.2 Energy Metabolism      Oxidative phosphorylation      ATP synthesis      Photosynthesis      Carbon fixation      Reductive carboxylate cycle (CO2 fixation)      Methane metabolism      Nitrogen metabolism      Sulfur metabolism 1.3 Lipid Metabolism      Fatty acid biosynthesis (path 1)      Fatty acid biosynthesis (path 2)      Fatty acid metabolism      Synthesis and degradation of ketone bodies      Biosynthesis of steroids      Bile acid biosynthesis      C21-Steroid hormone metabolism      Androgen and estrogen metabolism      Glycerolipid metabolism      Phospholipid degradation      Prostaglandin and leukotriene metabolism 1.4 Nucleotide Metabolism      Purine metabolism      Pyrimidine metabolism 1.5 Amino Acid Metabolism      Glutamate metabolism      Alanine and aspartate metabolism      Glycine, serine and threonine metabolism      Methionine metabolism      Cysteine metabolism      Valine, leucine and isoleucine degradation      Valine, leucine and isoleucine biosynthesis      Lysine biosynthesis      Lysine degradation      Arginine and proline metabolism      Histidine metabolism      Tyrosine metabolism      Phenylalanine metabolism      Tryptophan metabolism      Phenylalanine, tyrosine and tryptophan biosynthesis      Urea cycle and metabolism of amino groups 1.6 Metabolism of Other Amino Acids      beta-Alanine metabolism      Taurine and hypotaurine metabolism      Aminophosphonate metabolism      Selenoamino acid metabolism      Cyanoamino acid metabolism      D-Glutamine and D-glutamate metabolism      D-Arginine and D-ornithine metabolism      D-Alanine metabolism      Glutathione metabolism 1.7 Glycan Biosynthesis and Metabolism      N-Glycan biosynthesis      High-mannose type N-glycan biosynthesis      N-Glycan degradation      O-Glycan biosynthesis      Chondroitin / heparan sulfate biosynthesis      Keratan sulfate biosynthesis      Glycosaminoglycan degradation      Lipopolysaccharide biosynthesis      Peptidoglycan biosynthesis      Glycosylphosphatidylinositol(GPI)-anchor biosynthesis      Glycosphingolipid metabolism      Blood group glycolipid biosynthesis - lactoseries      Blood group glycolipid biosynthesis - neo-lactoseries      Globoside metabolism      Ganglioside biosynthesis 1.8 Biosynthesis of Polyketides and Nonribosomal Peptides      Type I polyketide structures      Biosynthesis of 12-, 14- and 16-membered macrolides      Biosynthesis of ansamycins      Biosynthesis of type II polyketide backbone      Biosynthesis of type II polyketide products      Polyketide sugar unit biosynthesis      Nonribosomal peptide structures      Biosynthesis of siderophore group nonribosomal peptides      Biosynthesis of vancomycin group antibiotics 1.9 Metabolism of Cofactors and Vitamins      Thiamine metabolism      Riboflavin metabolism      Vitamin B6 metabolism      Nicotinate and nicotinamide metabolism      Pantothenate and CoA biosynthesis      Biotin metabolism      Folate biosynthesis      One carbon pool by folate      Retinol metabolism      Porphyrin and chlorophyll metabolism      Ubiquinone biosynthesis 1.10 Biosynthesis of Secondary Metabolites      Terpenoid biosynthesis      Diterpenoid biosynthesis      Monoterpenoid biosynthesis      Limonene and pinene degradation      Indole and ipecac alkaloid biosynthesis      Stilbene, coumarine and lignin biosynthesis      Flavonoid biosynthesis      Alkaloid biosynthesis I      Alkaloid biosynthesis II      Penicillins and cephalosporins biosynthesis      beta-Lactam resistance      Streptomycin biosynthesis      Tetracycline biosynthesis      Clavulanic acid biosynthesis      Puromycin biosynthesis      Novobiocin biosynthesis 1.11 Biodegradation of Xenobiotics      Caprolactam degradation      Biphenyl degradation      Toluene and xylene degradation      gamma-Hexachlorocyclohexane degradation      3-Chloroacrylic acid degradation      1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation      2,4-Dichlorobenzoate degradation      1,2-Dichloroethane degradation      Tetrachloroethene degradation      Styrene degradation      1,4-Dichlorobenzene degradation      Nitrobenzene degradation      Ethylbenzene degradation      Fluorene degradation      Carbazole degradation      Benzoate degradation via CoA ligation      Benzoate degradation via hydroxylation      Atrazine degradation 2. Genetic Information Processing 2.1 Transcription      RNA polymerase      Basal transcription factors      Transcription factors      RNA biosynthesis       > mRNA - Bacteria       > mRNA - Eukaryotes       > tRNA - Bacteria       > tRNA - Eukaryotes       > rRNA - Bacteria       > rRNA - Eukaryotes 2.2 Translation      Ribosome      Translation factors      Aminoacyl-tRNA biosynthesis      Protein biosynthesis       > Bacteria       > Eukaryotes 2.3 Sorting and Degradation      Protein export      Type II secretion system      Type III secretion system      Type IV secretion system      Ubiquitin mediated proteolysis      Proteasome 2.4 Replication and Repair      DNA polymerase 3. Environmental Information Processing 3.1 Membrane Transport      ABC transporters, prokaryotic type      ABC transporters, ABC-2 and other types      Phosphotransferase system (PTS) 3.2 Signal Transduction      Two-component system      MAPK signaling pathway      Wnt signaling pathway      TGF-beta signaling pathway      Toll-like receptor signaling pathway      Jak-STAT signaling pathway      Second messenger signaling pathway      Phosphatidylinositol signaling system 3.3 Ligand-Receptor Interaction      G-protein coupled receptors      Neuroactive ligand-receptor interaction      Ion channels      Cytokines      Cytokine receptors      Cytokine-cytokine receptor interaction 3.4 Immune System      Complement and coagulation cascades 4. Cellular Processes 4.1 Cell Motility      Bacterial chemotaxis      Flagellar assembly      Regulation of actin cytoskeleton 4.2 Cell Growth and Death      Cell cycle      Apoptosis 4.3 Cell Communication      Integrin-mediated cell adhesion      Cadherin-mediated cell adhesion 4.4 Development      Notch signaling pathway      Dorso-ventral axis formation 4.5 Behavior      Circadian rhythm 5. Human Diseases 5.1 Neurodegenerative Disorders     Alzheimer's disease     Parkinson's disease     Amyotrophic lateral sclerosis (ALS)     Huntington's disease     Dentatorubropallidoluysian atrophy (DRPLA)     Prion disease 5.2 Infectious Diseases     Cholera 5.3 Metabolic Disordersnbsp; Huntington's disease     Dentatorubropallidoluysian atrophy (DRPLA)     Prion disease 5.2 Infectious Diseases     Cholera 5.3 Metabolic Disorders

Looking for: KEGG recorded KEGG non-recorded enzymes

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